HPC Technology Strategies for Fighting COVID

By marketing@site-a.com

We’re amid unprecedented times — COVID-19 has forced government officials to shut down schools, businesses, and public areas across the world. Thousands upon thousands have fallen ill with hospital workers worrying about reaching maximum capacity and depleting supply inventory. The amount of infections are projected to rise substantially each day, marking no end in sight for this worldwide pandemic. 

Hospitals, health care organizations and research companies are working around the clock to find proper drug treatments and vaccines to combat the virus. With so much on the line, it’s imperative that our country’s leading care givers and researches have access to the best resources available to perform life saving research. The obvious resources are those needed at the front line including ventilators, N95 masks, masks, gloves, etc.  But the not so obvious resources are just as vitally important.  These including high performance computing (HPC), artificial intelligence and big data platforms. Below are just a few of the many ways that advanced technology tools and HPC can be used in the fight against COVID-19.

3 Technologies Taking On COVID-19

  1. Modeling and Visualization.  The real fight against this killer virus will be won with data.  The need for real time analysis of extremely large data sets has never been greater.  Our ability to ingest, interpret and visualize data in order to see what is happening at both the microscopic and global levels can substantially flatten the curve which will ultimately lead to saving lives. Recently one of our clients presented a model of the infection and death rate in Hawaii.  His models were so accurate that he is predicting within 1% margin of error at this point.  Government agencies can use these extremely exact data models to prepare hospitals and care workers.  It can help ensue there are enough resources in place before things are out of control.  Better prediction models equals saved lives.
  2. Bioinformatics. In order to understand what we are fighting we must first be able to sequence the virus’ genome.  This is actually very simple to so since the field of genomics has been in place for nearly 15 years.  Using HPC platforms and bioinformatics tools, research organizations have begun extensive sequencing of COVID-19. Being able to accurately identify the viral genome enables researchers to understand how it has become so successful in attacking us and spreading across the globe. Understanding the virus itself is imperative to discovering how to defeat it. Scientist can see where the virus bonds to the host cells and replicates.  If we are able to disrupt the bonding and replication then we have a fighting chance to defeat COVID-19.
  3. Computational Chemistry.  Organizations working on drug treatment are likely utilizing computational chemistry — a branch of chemistry that uses computer simulations to solve chemical problems. With this type of work, organizations can test the effects of specific drug or drug combinations on the virus in an effort to identify which drugs render the virus useless or ineffective. If the virus is prevented from attaching to a host or from replicating, researchers would catapult closer to an effective vaccine. 

Our world is in the fight of a lifetime — something no one has seen or lived through before. It’s more important than ever that hospitals, health care agencies and life science organizations of all sizes are able to do the work they need to do to protect and save lives. PSSC Labs is proud to support many organizations working to defeat COVID-19.  For these researchers having immediate access to the on-premise platforms they need can not be overstated. While other companies wait for cloud resources to become available, organizations that made the right decision to invest in their own technology platforms will lead us to the cure.

PSSC Labs Featured in Cloud Tech News: Four industries where on-premises infrastructure beats the cloud

By marketing@site-a.com

Cloud computing has fundamentally transformed information technology by offering enterprises an allegedly cheaper, more flexible, and relatively maintenance-free alternative to purchasing their own IT infrastructure. However, despite the mad rush to migrate to the cloud, cloud solutions are not always the best or least expensive choice, particularly in industries that work with very large, complex data sets, perform many intricate mathematical calculations, possess invaluable digital intellectual property, or are subject to certain compliance standards.

Let’s take a look at four industries where in-house IT infrastructure still beats the cloud.

Cybersecurity

In the cybersecurity field, the ability to process extremely large data sets as quickly as possible is crucial, especially as cyber attacks shift away from “lone wolf” one-off hacks and towards highly organized, sophisticated operations carried out by well-trained cyber criminals. IBM estimates that the average organization encounters an average of 200,000 security event alerts each day. An enormous amount of computing power is required to run the SIEM systems that not only detect those anomalies, but also analyze them, separate the false positives from the possible attacks, and deliver actionable information to security analysts – way more power than even the most robust cloud solution could possibly deliver.

In addition to latency problems, the amount of bandwidth consumed would become very expensive, very quickly, making on-premises equipment the most cost-effective solution over time. On-premises cybersecurity hardware also prevents chain-reaction situations where client organizations end up getting hacked because the cloud vendor that their cybersecurity provider was using did.

Adtech

The internet has transformed the way in which consumers and businesses shop. Long buying cycles have been replaced by “just-in-time,” last-minute purchasing decisions, and advertising-weary prospects are using ad blockers, email filters, and DVR fast-forward functions to tune out traditional advertising. To reach these elusive prospects, companies are turning to ad tech, which employs extensive market research and big data analytics to deliver highly targeted marketing messages to qualified prospects at the precise time that they are ready to buy.

The complex data sets and high-level analytics that power the ad tech industry require computing power that is already beyond what any could solution could offer. As the industry matures, ad tech firms will require even more power and more storage space. On-premises equipment can be scaled much more quickly than cloud solutions, and latency problems are avoided.

The ad tech industry also faces intellectual property issues. As Amazon, Google, and other cloud providers enter the market research and ad tech spaces themselves, questions arise as to the safety of digital intellectual property stored on a competing company’s cloud service. Dropbox listed Amazon’s move into the file-sharing space as one of the reasons why it decided to ditch AWS for its own equipment.

Life sciences

The life sciences industry is grappling with a “data avalanche” of clinical results, disease states, scientific studies, and individual patient data, which results in stratospheric cloud bills and latency problems. Because researchers work on limited budgets, simply storing all of this data on the cloud could deplete a project’s funding – and that’s before anything is actually done with it.

Cyber security and compliance issues also come into play due to the sensitive nature of this data. Storing patient data on the cloud may result in an organization running afoul of HIPAA and other privacy regulations if the cloud provider gets hacked, even if the hack turns out to be the provider’s fault.

Finally, on-premises hardware, unlike cloud solutions, keeps running even if the internet is down, which makes on-site equipment a must for scientists who are performing research in remote areas where internet access is spotty.

Design and engineering

Much like cyber security, ad tech, and the life sciences, design and engineering involves performing intricate calculations on very large, complex data sets, as well as running memory-intensive software and generating terabytes of new data every day. A cloud solution would be both wildly expensive and far too slow. In particular, cloud servers offer very poor interdomain communication; a physical server equipped with a high-performance communication architecture such as Intel’s Omni-Path is less expensive than a cloud solution is less expensive and offers low communication latency, low power consumption, and a high throughput.

Design and engineering companies also face a constant threat from digital intellectual property theft; everything from new product prototypes to R&D data could be targeted by competitors, cyber extortionists, or even foreign governments. Digital IP is simply too sensitive to be stored in the cloud, especially since hackers are increasingly targeting cloud providers as the industry grows.

Beyond cloud-first hype, a balanced approach

Despite its drawbacks, cloud computing does have a place in many organizations’ IT ecosystems. Many companies use on-premises equipment to handle standard functions and store highly sensitive data and employ cloud solutions when they require additional capacity or to store less-sensitive data.

Instead of migrating to the cloud because it’s trendy, and “everyone” says it costs less and offers more flexibility than in-house equipment, enterprises should take a step back, consider their individual computing needs, and perform an objective cost analysis.

Source: https://www.cloudcomputing-news.net/news/2017/dec/04/four-industries-where-premises-infrastructure-beats-cloud/

PSSC Labs Partners with Biosoft Integrators to Debut Specialized Genetic Research Cluster at ASHG 2017

By marketing@site-a.com

High functioning PowerWulf Bio Titanium Cluster provides unique turn-key solution for genetic research

LAKE FOREST, Calif., October 12, 2017 /PRWeb/ — PSSC Labs, a developer of custom High-Performance Computing (HPC) and Big Data computing solutions, today announced it will be showcasing its PowerWulf Bio Titanium Cluster at ASHG 2017. PSSC Labs will be on the main exhibition floor at booth #830.

The American Society of Human Genetics (ASHG) the primary professional membership organization for human genetics specialists worldwide. With nearly 8,000 members, the ASHG gathers researchers, academicians, clinicians, laboratory practice professionals, genetic counselors, and others who have a special interest in the field of human genetics. Their annual meeting, attended by over 6,000 people yearly, advances genetic research and education as well as attracting displays of cutting edge service and support for the genetic research community.

PSSC Labs has partnered with Biosoft Integrators (BSI) to create a superior, complete turn-key hardware and software platform designed specifically for genetic research, which it will debut at this year’s ASHG meeting. The PowerWulf Bio Titanium Cluster is a plug-and-play supercomputing solution proven compatible with all leading sequencing platforms.

Biosoft Integrators (BSI) works with researchers around the world to integrate laboratory technology platforms. With extensive experience in laboratory settings, BSI provides researchers with greater efficiency and management by providing tools which unify the laboratory and laboratory informatics, eliminating the need to manually communicate work and data between different software and equipment. Combine their deep research knowledge with PSSC’s superior customizable hardware, the resulting PowerWulf Bio Titanium Cluster provides an unprecedented level of integration and support. With a fully customizable suite of hardware and software, and available onsite installation and training, it is the simplest way for research scientist to set up or expand their research computing ability.

PowerWulf Bio Titanium Cluster Features: 

  • Latest Intel Xeon processors
  • High Memory Amounts for Large Data Sets
  • High Performance Network Backplane providing up to 100 Gbps speeds
  • Large Storage Capabilities Ranging from 20TB to Multiple Petabytes.

“Our partnership with PSSC Labs over the last 6 years has allowed us to provide the fastest and most reliable computing solutions to our customers across the globe,” said Stu Shannon Co- Founder and COO of BSI. “PSSC’s expertise in High Performance Computing components and server architecture allowed us to configure a best in class turn-key solution for our worldwide customer base to support rapid time to answer, high availability and complete customer satisfaction.”

Every PowerWulf Bio Titanium Cluster includes a three-year unlimited phone / email support package (additional year support available) with all support provided by a US based team of experienced engineers. For more information https://www.site-a.com/solutions/hpc-cluster/

Source: http://www.prweb.com/releases/2017/10/prweb14789255.htm